Stem-loop cme-MIR408

Accession

MI0023257

Description

Cucumis melo cme-MIR408 precursor miRNA

Gene family

MIPF0000102; MIR408

Sequence

gagcagcggggaacagacagagcaugaauggaguccucaacagucucaaaaucaaaucaacacauaccuuuuacccuuuuaucuuccuguugugccucuacucAUGCACUGCCUCUUCCCUGGCugccccuuau
..(((((((((((.((.(((.((((((.(((((.(..((((((...........................................)))))).).))))).)))))).))).)).)))))).))))).......

Structure

-----ga     -      c  a   a      a     u cu      ucucaaaaucaaaucaacac 
       gcagc ggggaa ag cag gcauga uggag c  caacag                    a
       ||||| |||||| || ||| |||||| ||||| |  ||||||                    u
       cguCG UCCCUU UC GUC CGUAcu aucuc g  guuguc                    a
uauuccc     G      C  C   A      c     c -u      cuucuauuuucccauuuucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR408

• Accession: MIMAT0026153
• Description: Cucumis melo cme-miR408 mature miRNA
• Sequence: 104 - AUGCACUGCCUCUUCCCUGGC - 124
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877