Stem-loop cme-MIR399b

Accession

MI0023271

Description

Cucumis melo cme-MIR399b precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

gucuuagggcaaucucuuucuuggcagguucuuggcuuuuuacauuauucaucacaauacacauauauauguguguauauauauuuaucauaauauuuauuguuuuuauaucauucccuauauaacuUGCCAAAGGAGAGUUGCCCUAugacugcuau
(((.((((((((.((((((.((((((((((...((.....................(((((((((....)))))))))..(((((......)))))....................)).....)))))))))).)))))))))))))).)))......

Structure

------   u        u      c          --cuu  -----------------cuuuuuacauuauucaucaca         u 
      guc uagggcaa cucuuu uuggcagguu     gg                                      auacacaua a
      ||| |||||||| |||||| ||||||||||     ||                                      |||||||||  
      cag AUCCCGUU GAGAGG AACCGUucaa     cc                                      uaugugugu u
uaucgu   u        -      A          uauau  cuuacuauauuuuuguuauuuauaauacuauuuauaua         a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR399b

• Accession: MIMAT0026167
• Description: Cucumis melo cme-miR399b mature miRNA
• Sequence: 128 - UGCCAAAGGAGAGUUGCCCUA - 148
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877