Stem-loop cme-MIR159b

Accession

MI0023272

Description

Cucumis melo cme-MIR159b precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

1 open access papers mention cme-MIR159b
(1 sentences)

Sequence

gcgauggagcucccuuugauucaaagagagggugggaggaaggugaaaggaagugcugcgaguucaugaauaccuguggggugccgcucugccuccauggcggccgcaccuuccaaagguuugcaugcgcucggagcuguucuuaccuucucuuuuccuuuAUUGGAUUGAAGGGAGCUCCUcuuaauaacc
..((.(((((((((((((((((((..((((((.(((((.((((((...((((..(((.(((((.((((...((((.((((((((.(((..(((.....)))))).)))))..))).))))...)))).))))).)))..))))))))))))))).)))))).))))))))))))))))))))).........

Structure

-------gc  u                   ag      u     g      aaa    gu   g     u    aau    g   --     c   cu   u 
         ga ggagcucccuuugauucaa  agaggg gggag aaggug   ggaa  gcu cgagu caug   accu ugg  ggugc gcu  gcc c
         || |||||||||||||||||||  |||||| ||||| ||||||   ||||  ||| ||||| ||||   |||| |||  ||||| |||  ||| c
         cU CCUCGAGGGAAGUUAGGUU  uuuccu uucuc uuccau   ucuu  cga gcucg guac   ugga acc  ccacg cgg  cgg a
ccaauaauu  -                   -A      u     -      ---    gu   g     c    guu    a   uu     c   --   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR159b

• Accession: MIMAT0026168
• Description: Cucumis melo cme-miR159b mature miRNA
• Sequence: 162 - AUUGGAUUGAAGGGAGCUCCU - 182
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877