Stem-loop cme-MIR160b

Accession

MI0023275

Description

Cucumis melo cme-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

1 open access papers mention cme-MIR160b
(1 sentences)

Sequence

cuuucaauaUGCCUGGCUCCCUGUAUGCCAuuuguagagcgcucaccgucauucccgauggccuccgcgcauggcguaugaggagccaagcauauccauauc
......((((((.(((((((.((((((((((.(((.(((.((.((.((.......)).))))))).))).)))))))))).))))))).)))))).......

Structure

-cuuuca      C       C          u   a   c  u  c  uc 
       auaUGC UGGCUCC UGUAUGCCAu ugu gag gc ca cg  a
       |||||| ||||||| |||||||||| ||| ||| || || ||  u
       uauacg accgagg guaugcggua gcg cuc cg gu gc  u
cuauacc      a       a          c   c   -  -  a  cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR160b

• Accession: MIMAT0026171
• Description: Cucumis melo cme-miR160b mature miRNA
• Sequence: 10 - UGCCUGGCUCCCUGUAUGCCA - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877