Stem-loop cme-MIR171h

Accession

MI0023277

Description

Cucumis melo cme-MIR171h precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

1 open access papers mention cme-MIR171h
(1 sentences)

Sequence

ugaagguauugacgugucucaauuugaaagguacaugguuuaauguuugcuaaaaaaauugggaaaauuauuaauuuguguuagggcuuagccguguguguuuucUGAUUGAGCCGCGUCAAUAUCucuucucaaa
...(((((((((((((.(((((((.(((((.(((((((((....(((..((((..(((((((........)))))))...)))))))..)))))))))..))))).))))))).))))))))))))).........

Structure

------uga             u       u     -g         uaau   ug    -aa       gaa 
         agguauugacgug cucaauu gaaag  uacaugguu    guu  cuaa   aaauugg   a
         ||||||||||||| ||||||| |||||  |||||||||    |||  ||||   |||||||    
         uCUAUAACUGCGC GAGUUAG cuuuu  gugugccga    cgg  gauu   uuuaauu   a
aaacucuuc             C       U     gu         --uu   --    gug       auu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR171h

• Accession: MIMAT0026173
• Description: Cucumis melo cme-miR171h mature miRNA
• Sequence: 106 - UGAUUGAGCCGCGUCAAUAUC - 126
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877