miRBase entry: cme-MIR167e

Stem-loop cme-MIR167e


Accession
MI0023281
Description
Cucumis melo cme-MIR167e precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
1 open access papers mention cme-MIR167e
(1 sentences)

Sequence

uuauaucaguUCAAGCUGCCAGCAUGAUCUAaccuuaaccucuccuaauuuuuaauuuuuaauuuuguaaauauugagguuaaugaucagaucauauggcaguuuuaccuguuauug
..(((.(((...(((((((((..(((((((...(((((((((.....((((.(((.........))).))))...)))))))).)...))))))).)))))))))...))).)))..

Structure
uu   u   uUC         GC       Aac -        uccua    u   uuu 
  aua cag   AAGCUGCCA  AUGAUCU   c uuaaccuc     auuu uaa   u
  ||| |||   |||||||||  |||||||   | ||||||||     |||| |||   u
  uau guc   uuugacggu  uacuaga   g aauuggag     uaaa guu   a
gu   u   cau         -a       cua u        --uua    u   uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR167e

Accession MIMAT0026177
Description Cucumis melo cme-miR167e mature miRNA
Sequence 11 - UCAAGCUGCCAGCAUGAUCUA - 31
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877