miRBase entry: cme-MIR160d

Stem-loop cme-MIR160d


Accession
MI0023282
Description
Cucumis melo cme-MIR160d precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
1 open access papers mention cme-MIR160d
(1 sentences)

Sequence

uaugcccccUGCCUGGCUCCCUGAAUGCCAacuacgaaggcuuugcuaaaaguucuuauucgcauccuucuuaauuggcaucacgggagucaugcaggcaccuuua
.......(((((.(((((((((((.((((((.((.(((((...(((...............))).))))).)).))))))))).)))))))).)))))........

Structure
-uaugccc     C        -   A      c  c     cuu   uaaaag 
        ccUGC UGGCUCCC UGA UGCCAa ua gaagg   ugc      u
        ||||| |||||||| ||| |||||| || |||||   |||      u
        ggacg acugaggg acu acgguu au cuucc   acg      c
auuuccac     u        c   -      a  u     --u   cuuauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR160d

Accession MIMAT0026178
Description Cucumis melo cme-miR160d mature miRNA
Sequence 10 - UGCCUGGCUCCCUGAAUGCCA - 30
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877