Stem-loop cme-MIR530a

Accession

MI0023286

Description

Cucumis melo cme-MIR530a precursor miRNA

Gene family

MIPF0000521; MIR530

Sequence

cccuucaucUGCAUUUGCACCUGCACCUUauucaacuucucucuucucucuccaccaacgauauagaagaacaugaguaugaagaacaaaaggugagagaaaaaaaggaucaauaauucaaaggugcuggugcauuugcagcugaaugccaucuuggaaa
...((((.(((((..((((((.((((((((((.....(((......((((((.(((...................................)))))))))......))).....)))...))))))).))))))..))))).))))..(((...)))...

Structure

-----------ccc    u     UU      U       ---   caacu   cucuuc      c   aacgauauagaagaac 
              uuca cUGCA  UGCACC GCACCUU   auu     ucu      ucucuc acc                a
              |||| |||||  |||||| |||||||   |||     |||      |||||| |||                u
              aagu gacgu  acgugg cguggaa   uaa     agg      agagag ugg                g
aaagguucuaccgu    c     uu      u       acu   uaacu   aaaaaa      -   aaaacaagaaguauga 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR530a

• Accession: MIMAT0026182
• Description: Cucumis melo cme-miR530a mature miRNA
• Sequence: 10 - UGCAUUUGCACCUGCACCUU - 29
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877