miRBase entry: cme-MIR169t

Stem-loop cme-MIR169t


Accession
MI0023291
Description
Cucumis melo cme-MIR169t precursor miRNA

Literature search
1 open access papers mention cme-MIR169t
(1 sentences)

Sequence

UGAGCCAAGAAUGACUUGCCGGCcgacuuucgacaccugucguucucuggucggcgcggucuucuucggcucuug
.((((((((((.(((((((((((((.....((((....)))).....))))))))).))))))))).)))))...

Structure
--U     -     U    -         acuuu    a 
   GAGCC AAGAA GACU UGCCGGCcg     cgac c
   ||||| ||||| |||| |||||||||     ||||  
   cucgg uucuu cugg gcggcuggu     gcug c
guu     c     -    c         cucuu    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR169t

Accession MIMAT0026187
Description Cucumis melo cme-miR169t mature miRNA
Sequence 1 - UGAGCCAAGAAUGACUUGCCGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22375710
    Cucumis melo microRNA expression profile during aphid herbivory in a resistant and susceptible interaction
    "Sattar S, Song Y, Anstead JA, Sunkar R, Thompson GA"
    "Mol Plant Microbe Interact (2012) 25:839-848