Stem-loop ddi-mir-7131c

Accession

MI0023296

Description

Dictyostelium discoideum ddi-mir-7131c precursor miRNA

Gene family

MIPF0001675; mir-7131

Sequence

ccaugccaaaauaaauauGGCUGCUGAAAUUAAUAUGGCaugggacuuaugucugcuagaauuacCAUAUUAAUUUCAGCAGCCAUauuaauuuuggcaugc
.(((((((((((.(((((((((((((((((((((((((....((((....))))..........))))))))))))))))))))))))).))))))))))).

Structure

c           a                         ------Caug    u 
 caugccaaaau aauauGGCUGCUGAAAUUAAUAUGG          ggac u
 ||||||||||| |||||||||||||||||||||||||          ||||  
 guacgguuuua uuaUACCGACGACUUUAAUUAUACc          ucug a
c           a                         auuaagaucg    u 

Annotation confidence Not enough data

Genome context

DDB0232432: 2966800-2966901 [+]

Mature ddi-miR-7131c-5p

• Accession: MIMAT0028141
• Description: Dictyostelium discoideum ddi-miR-7131c-5p mature miRNA
• Sequence: 19 - GGCUGCUGAAAUUAAUAUGGC - 39
• Evidence: experimental ; SOLiD [1]

Mature ddi-miR-7131c-3p

• Accession: MIMAT0028142
• Description: Dictyostelium discoideum ddi-miR-7131c-3p mature miRNA
• Sequence: 66 - CAUAUUAAUUUCAGCAGCCAU - 86
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22875808
   MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs
   "Avesson L, Reimegard J, Wagner EG, Soderbom F"
   "RNA (2012) 18:1771-1782