miRBase entry: ccr-let-7b

Stem-loop ccr-let-7b


Accession
MI0023298
Description
Cyprinus carpio ccr-let-7b precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
6 open access papers mention ccr-let-7b
(32 sentences)

Sequence

agggUGAGGUAGUAGGUUGUGUGGUUucaggguagugauuuugccccaucaggagauaacuauacaaccuacugccuuccc
.(((.(((((((((((((((((((((((.((((((.....))))))........)).))))))))))))))))))))))))

Structure
a   U                     -  -------a      u 
 ggg GAGGUAGUAGGUUGUGUGGUU uc        ggguag g
 ||| ||||||||||||||||||||| ||        |||||| a
 ccc uuccgucauccaacauaucaa ag        cccguu u
-   -                     u  aggacuac      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-let-7b

Accession MIMAT0026190
Description Cyprinus carpio ccr-let-7b mature miRNA
Sequence 5 - UGAGGUAGUAGGUUGUGUGGUU - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925