Stem-loop ccr-let-7j

Accession

MI0023301

Description

Cyprinus carpio ccr-let-7j precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

6 open access papers mention ccr-let-7j
(31 sentences)

Sequence

cugcucuggguUGAGGUAGUUGUUUGUACAGUUuuuagggucuguuauucugcccuguuaaggaguuaacuguacagacuacugccuugcccagggu
..(((((((((.((((((((.((((((((((((..((((((..(.....).))))))..........)))))))))))).)))))))))))))))))

Structure

cu         U        U            --------uu      cu u 
  gcucugggu GAGGUAGU GUUUGUACAGUU          uagggu  g u
  ||||||||| |||||||| ||||||||||||          ||||||  | a
  ugggacccg uuccguca cagacaugucaa          gucccg  c u
--         -        u            uugaggaauu      -u u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-let-7j

• Accession: MIMAT0026193
• Description: Cyprinus carpio ccr-let-7j mature miRNA
• Sequence: 12 - UGAGGUAGUUGUUUGUACAGUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925