miRBase entry: ccr-mir-101b

Stem-loop ccr-mir-101b


Accession
MI0023305
Description
Cyprinus carpio ccr-mir-101b precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
1 open access papers mention ccr-mir-101b
(2 sentences)

Sequence

uuguccauuuucaguuaucaugguaccggugcugugugccugucaaGUACAGUACUAUGAUAACUGAagauugac
..(((.((((((((((((((((((((..(((((............))))).)))))))))))))))))))).)))

Structure
uu   c                    cg     gugug 
  guc auuuucaguuaucaugguac  gugcu     c
  ||| ||||||||||||||||||||  |||||      
  cag uagaAGUCAAUAGUAUCAUG  CAUGa     c
--   u                    -A     acugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-101b

Accession MIMAT0026197
Description Cyprinus carpio ccr-miR-101b mature miRNA
Sequence 47 - GUACAGUACUAUGAUAACUGA - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925