Stem-loop ccr-mir-122

Accession

MI0023311

Description

Cyprinus carpio ccr-mir-122 precursor miRNA

Gene family

MIPF0000095; mir-122

Literature search

3 open access papers mention ccr-mir-122
(9 sentences)

Sequence

caaaacaaggcugucacuuucucuccuguucuuucuagacugucauucugucguccuccugagcugUGGAGUGUGACAAUGGUGUUU
..(((((....((((((...((((.(.((((......(((.........)))........)))).).)))).))))))....)))))

Structure

ca     aggc      uuu    c u    --uuucua   ugu 
  aaaca    ugucac   cucu c guuc        gac   c
  |||||    ||||||   |||| | ||||        |||   a
  UUUGU    ACAGUG   GAGG g cgag        cug   u
--     GGUA      --U    U u    uccuccug   ucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-122

• Accession: MIMAT0026203
• Description: Cyprinus carpio ccr-miR-122 mature miRNA
• Sequence: 67 - UGGAGUGUGACAAUGGUGUUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925