miRBase entry: ccr-mir-15a-2

Stem-loop ccr-mir-15a-2


Accession
MI0023337
Description
Cyprinus carpio ccr-mir-15a-2 precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
1 open access papers mention ccr-mir-15a-2
(1 sentences)

Sequence

cuaggugauggugUAGCAGCACAGAAUGGUUUGUggugauacagagaugcaggccgugaugugcugcagcaucaauuccugg
(((((...((((((.((((((((..((((((((((............))))))))))..)))))))).))))))...)))))

Structure
     uga      A        GA          gugau 
cuagg   uggugU GCAGCACA  AUGGUUUGUg     a
|||||   |||||| ||||||||  ||||||||||      
ggucc   acuacg cgucgugu  ugccggacgu     c
     uua      a        ag          agaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-15a

Accession MIMAT0026228
Description Cyprinus carpio ccr-miR-15a mature miRNA
Sequence 14 - UAGCAGCACAGAAUGGUUUGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925