miRBase entry: ccr-mir-18c

Stem-loop ccr-mir-18c


Accession
MI0023352
Description
Cyprinus carpio ccr-mir-18c precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

uuuuaauauggucuuccugcUAAGGUGCAUCUUGUGUAGUUAGugaaguaguauaguaucuacugcgcuagaugcuccuuuuggcaggaggagcuguaua
.....((((((((((((((((((((.((((((.(((((((.((................))))))))).)))))).)))..))))))))))).)))))).

Structure
uuuua      -           --   U      U       U  ugaagua 
     auaugg ucuuccugcUA  AGG GCAUCU GUGUAGU AG       g
     |||||| |||||||||||  ||| |||||| ||||||| ||        
     uauguc aggaggacggu  ucc cguaga cgcguca uc       u
----a      g           uu   u      u       -  uaugaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-18c

Accession MIMAT0026248
Description Cyprinus carpio ccr-miR-18c mature miRNA
Sequence 21 - UAAGGUGCAUCUUGUGUAGUUAG - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925