Stem-loop ccr-mir-20a

Accession

MI0023367

Description

Cyprinus carpio ccr-mir-20a precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

gugcUAAAGUGCUUAUAGUGCAGGUAGuauuucuauaaucuACUGCAGUGUGAGCACUUGAAGUac
(((((.(((((((((((.(((((.(((.(((.....))))))))))).)))))))))))..)))))

Structure

     -A           G     G   u   u 
gugcU  AAGUGCUUAUA UGCAG UAG auu c
|||||  ||||||||||| ||||| ||| ||| u
caUGA  UUCACGAGUGU ACGUC Auc uaa a
     AG           G     -   -   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-20a-5p

• Accession: MIMAT0026265
• Description: Cyprinus carpio ccr-miR-20a-5p mature miRNA
• Sequence: 5 - UAAAGUGCUUAUAGUGCAGGUAG - 27
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-20a-3p

• Accession: MIMAT0026266
• Description: Cyprinus carpio ccr-miR-20a-3p mature miRNA
• Sequence: 42 - ACUGCAGUGUGAGCACUUGAAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925