miRBase entry: ccr-mir-738

Stem-loop ccr-mir-738


Accession
MI0023396
Description
Cyprinus carpio ccr-mir-738 precursor miRNA
Gene family
MIPF0001514; mir-738


Sequence

GCUACGGCCCGCGUCGGGAccuccgucucggugacccccucucucgggagggggcccggggcgggcggccuccccggcgcggcgccuc
.....(((((((((((((.((((((((((((.(.((((((((....))))))))))))))))))).))....)))))))))).)))..

Structure
GCUAC   -          ---A  -          u a        c 
     GGC CCGCGUCGGG    cc uccgucucgg g cccccucu u
     ||| ||||||||||    || |||||||||| | ||||||||  
     ccg ggcgcggccc    gg gggcggggcc c gggggagg c
---cu   c          cucc  c          - -        g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-738

Accession MIMAT0026296
Description Cyprinus carpio ccr-miR-738 mature miRNA
Sequence 1 - GCUACGGCCCGCGUCGGGA - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925