miRBase entry: ccr-mir-457a

Stem-loop ccr-mir-457a


Accession
MI0023402
Description
Cyprinus carpio ccr-mir-457a precursor miRNA
Gene family
MIPF0000006; mir-15


Sequence

cugacaguAGCAGCACAUCAAUAUUGGCagcugcccucucccuggguugccaguaugguuugugcugcucccgucag
(((((.(.(((((((((...(((((((((...((((.......)))))))))))))....))))))))).).)))))

Structure
     a u         -UCA         gcu    uc 
cugac g AGCAGCACA    AUAUUGGCa   gccc  u
||||| | |||||||||    |||||||||   ||||  c
gacug c ucgucgugu    uaugaccgu   uggg  c
     c c         uugg         ---    uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-457a

Accession MIMAT0026302
Description Cyprinus carpio ccr-miR-457a mature miRNA
Sequence 9 - AGCAGCACAUCAAUAUUGGC - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925