Stem-loop ccr-mir-724

Accession

MI0023409

Description

Cyprinus carpio ccr-mir-724 precursor miRNA

Literature search

3 open access papers mention ccr-mir-724
(3 sentences)

Sequence

28822 reads, 153.0 reads per million, 33 experiments

cagcagacuggauUUAAAGGGAAUUUGCGACUGUUuagucacauuauuaaaaCAGCCACACCUUCCUUUUAAGAUcuugccugcug
((((((.(.((((((((((((((..((.(.(((((((((......))).)))))).).))..)))))))).)))))).).))))))

Structure

      a u      -        UU  C A      -   ca 
cagcag c ggauUU AAAGGGAA  UG G CUGUUu agu  c
|||||| | |||||| ||||||||  || | |||||| |||   
gucguc g ucUAGA UUUUCCUU  AC C GACaaa uua  a
      c u      A        CC  A C      a   uu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-724-5p

• Accession: MIMAT0026311
• Description: Cyprinus carpio ccr-miR-724-5p mature miRNA
• Sequence: 14 - UUAAAGGGAAUUUGCGACUGUU - 35
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-724-3p

• Accession: MIMAT0058344
• Description: Cyprinus carpio ccr-miR-724-3p mature miRNA
• Sequence: 53 - CAGCCACACCUUCCUUUUAAGAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925