miRBase entry: ccr-mir-7a

Stem-loop ccr-mir-7a


Accession
MI0023416
Description
Cyprinus carpio ccr-mir-7a precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
4 open access papers mention ccr-mir-7a
(4 sentences)

Sequence

auuuugggcaccaUGGAAGACUAGUGAUUUUGUUGUUgugaagucaccggugcugacaacaagucacagucugccucagugaccagaau
(((((((.(((...((.(((((.(((((((.(((((((((....))).......)))))))))))))))))).))...))).)))))))

Structure
       g   caU  A     A       U      -------   a 
auuuugg cac   GG AGACU GUGAUUU GUUGUU       gug a
||||||| |||   || ||||| ||||||| ||||||       |||  
uaagacc gug   cc ucuga cacugaa caacag       cac g
       a   acu  g     -       -      ucguggc   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-7a

Accession MIMAT0026319
Description Cyprinus carpio ccr-miR-7a mature miRNA
Sequence 14 - UGGAAGACUAGUGAUUUUGUUGUU - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925