miRBase entry: ccr-mir-96

Stem-loop ccr-mir-96


Accession
MI0023422
Description
Cyprinus carpio ccr-mir-96 precursor miRNA
Gene family
MIPF0000072; mir-96

Literature search
1 open access papers mention ccr-mir-96
(1 sentences)

Sequence

cucuucuuugccuguUUUGGCACUAGCACAUUUUUGCUuuuuuauauauacgcugagcaaucauguguagugccaauaugggacaagacagaaau
.(((((((..(((((.(((((((((.(((((..((((((...............))))))..)))))))))))))).)))))..)))).)))...

Structure
--c   -    ug     U         G     UU      uuuuau 
   ucu ucuu  ccugu UUGGCACUA CACAU  UUGCUu      a
   ||| ||||  ||||| ||||||||| |||||  ||||||      u
   aga agaa  gggua aaccgugau gugua  aacgag      a
uaa   c    ca     u         -     cu      ucgcau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-96

Accession MIMAT0026326
Description Cyprinus carpio ccr-miR-96 mature miRNA
Sequence 16 - UUUGGCACUAGCACAUUUUUGCU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925