miRBase entry: ccr-mir-99

Stem-loop ccr-mir-99


Accession
MI0023423
Description
Cyprinus carpio ccr-mir-99 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

agccacuugucauuAACCCGUAGAUCCGAUCUUGUgauaaguuuaauggcaccaccguagauccgaucuugugauaaguuuaauggcacaagcucguucuaugggucucugucucugugguagaaaauc
.(((((..(.((...(((((((((..(((.((((((....(((....)))....((((.((.(..(((....)))..).)).)))))))))).))).)))))))))...)).)...)))))........

Structure
-------a     -uu u  uuA         UC   U      auaaguuuaauggcacca    a  u cg   u 
        gccac   g ca   ACCCGUAGA  CGA CUUGUg                  ccgu ga c  auc u
        |||||   | ||   |||||||||  ||| ||||||                  |||| || |  |||  
        uggug   c gu   uggguaucu  gcu gaacac                  ggua uu g  uag g
cuaaaaga     ucu u  cuc         -u   c      ------------------    a  u aa   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-99

Accession MIMAT0026327
Description Cyprinus carpio ccr-miR-99 mature miRNA
Sequence 15 - AACCCGUAGAUCCGAUCUUGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925