Stem-loop sequence bma-mir-5882b-3

Accession MI0023501
Description Brugia malayi miR-5882b-3 stem-loop
Gene family MIPF0001418; mir-5882
Stem-loop 
---        a      c   c   a  a     a   u 
   ugucauga uaugca ugu cug uu cccac gca a
   |||||||| |||||| ||| ||| || ||||| ||| u
   acaguauu auacgu aua gac aa gggug ugu c
cug        g      a   a   c  c     c   u
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Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Mature sequence bma-miR-5882b

Accession MIMAT0026386
Sequence

47 -  

ugggcaaccagaauaaugcauagu

 - 70

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Evidence not experimental

References

1
PMID:22216965 "Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel" Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C BMC Genomics. 13:4(2012).