Stem-loop sequence sbi-MIR6217b

Accession MI0023509
Description Sorghum bicolor miR6217b stem-loop
Gene family MIPF0001550; MIR6217
Stem-loop 
              c                  gag           -au             aa   u   -   -  -uc     uaa      ---           -uau  ua 
uagcuacaaaauaa uuauuuuguagccacuuu   uuacgauaauu   uauauuaauuuau  gau aua gua ac   uuuac   gugguu   uacuauaacau    gg  a
|||||||||||||| ||||||||||||||||||   |||||||||||   |||||||||||||  ||| ||| ||| ||   |||||   ||||||   |||||||||||    ||  a
auugauguuuuauu aauaagacaucgguggag   aaugcuauuaa   auaugauuaaaug  cua uau cau ug   aaaug   uaucaa   augauauugug    cc  u
              a                  aua           aau             --   u   a   a  uau     --c      acu           uacu  ua
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Genome context
Coordinates (Sorbi1) Overlapping transcripts
chr_5: 10984279-10984505 [+]
intergenic

Mature sequence sbi-miR6217b-5p

Accession MIMAT0026394
Sequence

24 -  

uagccacuuugaguuacgauaauu

 - 47

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Evidence not experimental

Mature sequence sbi-miR6217b-3p

Accession MIMAT0026395
Sequence

179 -  

aaaauuaucguaaauagagguggc

 - 202

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Evidence not experimental

References

1
PMID:22747909 "Computational identification and analysis of novel sugarcane microRNAs" Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC BMC Genomics. 13:290(2012).