Stem-loop sbi-MIR6229

Accession

MI0023530

Description

Sorghum bicolor sbi-MIR6229 precursor miRNA

Sequence

uguuaAUUCUCACUUGGGCGACGGAAAGGccaccguguauggauggggguggggguucgggGUUUUUCUCGCCGGGUGAGAAGGCa
((((..(((((((((((.(((..((((((((.(((.......((....)).......)))))))))))))))))))))))))))))

Structure

    aA           G   CG        a   uguaugg  g 
uguu  UUCUCACUUGG CGA  GAAAGGcc ccg       au g
||||  ||||||||||| |||  |||||||| |||       ||  
aCGG  AAGAGUGGGCC GCU  CUUUUUGg ggc       ug g
    --           -   --        -   uuggggg  g 

Annotation confidence Not enough data

Genome context

chr2: 23736679-23736764 [+]

Mature sbi-miR6229-5p

• Accession: MIMAT0026434
• Description: Sorghum bicolor sbi-miR6229-5p mature miRNA
• Sequence: 6 - AUUCUCACUUGGGCGACGGAAAGG - 29
• Evidence: not_experimental

Mature sbi-miR6229-3p

• Accession: MIMAT0026435
• Description: Sorghum bicolor sbi-miR6229-3p mature miRNA
• Sequence: 62 - GUUUUUCUCGCCGGGUGAGAAGGC - 85
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290