miRBase entry: mmu-mir-7220

Stem-loop mmu-mir-7220


Accession
MI0023715
Symbol
MGI: Mir7220
Description
Mus musculus mmu-mir-7220 precursor miRNA


Sequence

177 reads, 4 reads per million, 10 experiments
GGUGAGCUCUUGGUACCUUGGCgacaagaaggugagcCCAGGAACAAGGUCUCAGUCCGA
((((((.(((((...(((.(((.((......))..))).)))..))))).))))..))..

Structure
--  --    C     GUA   U   -g  aa 
  GG  UGAG UCUUG   CCU GGC  ac  g
  ||  |||| |||||   ||| |||  ||   
  CC  ACUC GGAAC   GGA Ccg  ug  a
AG  UG    U     -AA   C   ag  ga 


Annotation confidence Not enough data
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Genome context
chr18: 60953873-60953932 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-7220
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-7220-5p

Accession MIMAT0028408
Description Mus musculus mmu-miR-7220-5p mature miRNA
Sequence 1 - GGUGAGCUCUUGGUACCUUGGC - 22
Evidence experimental
Illumina [1-2]

Mature mmu-miR-7220-3p

Accession MIMAT0028409
Description Mus musculus mmu-miR-7220-3p mature miRNA
Sequence 38 - CCAGGAACAAGGUCUCAGUCCGA - 60
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45

  2. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351