miRBase entry: mdo-mir-181a-2

Stem-loop mdo-mir-181a-2


Accession
MI0023752
Description
Monodelphis domestica mdo-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

1505315 reads, 26756 reads per million, 5 experiments
AACAUUCAACGCUGUCGGUGAGUuuuuagauuuaaaagaaaCCAUCGACCGUUGACUGUGCC
.(((.((((((..(((((((.((((((.........))))))))))))))))))).)))...

Structure
--A   U      CU       A      aga 
   ACA UCAACG  GUCGGUG GUuuuu   u
   ||| ||||||  ||||||| ||||||   u
   UGU AGUUGC  CAGCUAC Caaaga   u
CCG   C      --       -      aaa 


Annotation confidence High
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Genome context
chr1: 419148106-419148167 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-181a-5p

Accession MIMAT0004154
Description Monodelphis domestica mdo-miR-181a-5p mature miRNA
Sequence 1 - AACAUUCAACGCUGUCGGUGAGU - 23
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-181a-2-3p

Accession MIMAT0031045
Description Monodelphis domestica mdo-miR-181a-2-3p mature miRNA
Sequence 42 - CCAUCGACCGUUGACUGUGCC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45