miRBase entry: mdo-mir-29a-2

Stem-loop mdo-mir-29a-2


Accession
MI0023759
Description
Monodelphis domestica mdo-mir-29a-2 precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

22711 reads, 380 reads per million, 5 experiments
CCGAUUUCUCUUGGUGUUCAGagucuguuuuugucUAGCACCAUUUGAAAUCGGUU
((((((((...(((((((.(((...........))))))))))...))))))))..

Structure
--        UCU       C   gucu 
  CCGAUUUC   UGGUGUU AGa    g
  ||||||||   ||||||| |||    u
  GGCUAAAG   ACCACGA Ucu    u
UU        UUU       -   guuu 


Annotation confidence High
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Genome context
chr2: 114183793-114183848 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-29a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-29a-3p

Accession MIMAT0004164
Description Monodelphis domestica mdo-miR-29a-3p mature miRNA
Sequence 36 - UAGCACCAUUUGAAAUCGGUU - 56
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-29a-2-5p

Accession MIMAT0031023
Description Monodelphis domestica mdo-miR-29a-2-5p mature miRNA
Sequence 1 - CCGAUUUCUCUUGGUGUUCAG - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45