Stem-loop mdo-mir-9a-3

Accession

MI0023762

Description

Monodelphis domestica mdo-mir-9a-3 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

1671887 reads, 25238 reads per million, 5 experiments

UCUUUGGUUAUCUAGCUGUAUGAguggugucgagucuucAUAAAGCUAGAUAACCGAAAGUa
..(((((((((((((((.((((((.(.(....).).)))))).)))))))))))))))....

Structure

--UC               G      u g g 
    UUUGGUUAUCUAGCU UAUGAg g u u
    ||||||||||||||| |||||| | |  
    AAGCCAAUAGAUCGA AUAcuu u a c
aUGA               A      c g g 

Annotation confidence High

Genome context

chr2: 191328853-191328914 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-9a-3

Mature mdo-miR-9a-3p

• Accession: MIMAT0004088
• Description: Monodelphis domestica mdo-miR-9a-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-9a-5p

• Accession: MIMAT0004087
• Description: Monodelphis domestica mdo-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45