Stem-loop mdo-mir-7269

Accession

MI0023771

Description

Monodelphis domestica mdo-mir-7269 precursor miRNA

Sequence

46316 reads, 1030 reads per million, 5 experiments

AGAAAUCUGUCAGGGCGUGGGCGcuggcuuaucaaugaugcaCCCCCCCCAAGCAGUUUUUUCC
.((((.((((..(((.(.(((.((...............)).)))).)))..)))).))))...

Structure

--A    U    CA   C U   C  uggcuu 
   GAAA CUGU  GGG G GGG Gc      a
   |||| ||||  ||| | ||| ||      u
   UUUU GACG  CCC C CCC cg      c
CCU    U    AA   C -   a  uaguaa 

Annotation confidence High

Genome context

chr2: 541547457-541547520 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-7269

Mature mdo-miR-7269-5p

• Accession: MIMAT0028508
• Description: Monodelphis domestica mdo-miR-7269-5p mature miRNA
• Sequence: 1 - AGAAAUCUGUCAGGGCGUGGGCG - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7269-3p

• Accession: MIMAT0028509
• Description: Monodelphis domestica mdo-miR-7269-3p mature miRNA
• Sequence: 43 - CCCCCCCCAAGCAGUUUUUUCC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45