miRBase entry: mdo-mir-130c-2

Stem-loop mdo-mir-130c-2


Accession
MI0023803
Description
Monodelphis domestica mdo-mir-130c-2 precursor miRNA
Gene family
MIPF0000034; mir-130


Sequence

3982 reads, 68 reads per million, 5 experiments
GCCCUUUUCUUGUUGCCCUGCUgagccagcgagggggCAGUGCAAUGUUAAAAGGGCAU
((((((((..((((((.(((((...((.....)).))))).))))))..))))))))..

Structure
--        CU      C     gag  a 
  GCCCUUUU  UGUUGC CUGCU   cc g
  ||||||||  |||||| |||||   || c
  CGGGAAAA  GUAACG GACgg   gg g
UA        UU      U     --g  a 


Annotation confidence Not enough data
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Genome context
chr3: 511102163-511102221 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-130c-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-130c-3p

Accession MIMAT0028515
Description Monodelphis domestica mdo-miR-130c-3p mature miRNA
Sequence 38 - CAGUGCAAUGUUAAAAGGGCAU - 59
Evidence experimental
Illumina [1]

Mature mdo-miR-130c-2-5p

Accession MIMAT0031110
Description Monodelphis domestica mdo-miR-130c-2-5p mature miRNA
Sequence 1 - GCCCUUUUCUUGUUGCCCUGCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45