Stem-loop mdo-mir-2970

Accession

MI0023861

Description

Monodelphis domestica mdo-mir-2970 precursor miRNA

Gene family

MIPF0001328; mir-2970

Sequence

1572 reads, 32 reads per million, 5 experiments

GACAGUCAGUAGUUGGUCUGGugugagcaggaauucucAGAUCACCUCUUGGCUGUGAG
.((((((((.((.((((((((.((........)).).))))))).)).))))))))...

Structure

--G        U  U       - u  gag 
   ACAGUCAG AG UGGUCUG G gu   c
   |||||||| || ||||||| | ||    
   UGUCGGUU UC ACUAGAc c ua   a
GAG        C  C       u u  agg 

Annotation confidence Not enough data

Genome context

chr6: 201968080-201968138 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-2970

Mature mdo-miR-2970-5p

• Accession: MIMAT0028670
• Description: Monodelphis domestica mdo-miR-2970-5p mature miRNA
• Sequence: 1 - GACAGUCAGUAGUUGGUCUGG - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-2970-3p

• Accession: MIMAT0028671
• Description: Monodelphis domestica mdo-miR-2970-3p mature miRNA
• Sequence: 39 - AGAUCACCUCUUGGCUGUGAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45