miRBase entry: mdo-mir-1545b-1

Stem-loop mdo-mir-1545b-1


Accession
MI0023926
Description
Monodelphis domestica mdo-mir-1545b-1 precursor miRNA
Gene family
MIPF0001711; mir-1545


Sequence

34656 reads, 725 reads per million, 5 experiments
AGUGUUCUGGGAUAGAUAGGCGAucuccuugcaauccACCUUUCCAUCCUGGGCAUUGG
(((((((.(((((.((.(((.(..............).))).)).))))))))))))..

Structure
--       U     A  U   C Aucucc 
  AGUGUUC GGGAU GA AGG G      u
  ||||||| ||||| || ||| |       
  UUACGGG UCCUA CU UCC c      u
GG       -     C  U   A cuaacg 


Annotation confidence High
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Genome context
chrX: 13966015-13966073 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from mdo-mir-1545b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-1545b-5p

Accession MIMAT0028750
Description Monodelphis domestica mdo-miR-1545b-5p mature miRNA
Sequence 1 - AGUGUUCUGGGAUAGAUAGGCGA - 23
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-1545b-3p

Accession MIMAT0028751
Description Monodelphis domestica mdo-miR-1545b-3p mature miRNA
Sequence 38 - ACCUUUCCAUCCUGGGCAUUGG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45