Stem-loop mdo-mir-1545c

Accession

MI0023930

Description

Monodelphis domestica mdo-mir-1545c precursor miRNA

Gene family

MIPF0001711; mir-1545

Sequence

14973 reads, 262 reads per million, 5 experiments

AGUGCCCUGGGAUAGAUAAGAGGUccccuuaaaaucCACUUUCCAUCCCUCGUACUGU
(((((...(((((.((.(((.((............)).))))).)))))..)))))..

Structure

--     CCU     A  U   A  Ucccc 
  AGUGC   GGGAU GA AAG GG     u
  |||||   ||||| || ||| ||      
  UCAUG   CCCUA CU UUC Cc     u
UG     -CU     C  -   A  uaaaa 

Annotation confidence High

Genome context

chrX: 14007943-14008000 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-1545c

Mature mdo-miR-1545c-5p

• Accession: MIMAT0028752
• Description: Monodelphis domestica mdo-miR-1545c-5p mature miRNA
• Sequence: 1 - AGUGCCCUGGGAUAGAUAAGAGGU - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545c-3p

• Accession: MIMAT0028753
• Description: Monodelphis domestica mdo-miR-1545c-3p mature miRNA
• Sequence: 37 - CACUUUCCAUCCCUCGUACUGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45