miRBase entry: mdo-mir-7373c

Stem-loop mdo-mir-7373c


Accession
MI0023960
Description
Monodelphis domestica mdo-mir-7373c precursor miRNA


Sequence

6964 reads, 107 reads per million, 5 experiments
AAGCCCUUUUAUUAAUCAUCUGCGugaucuuacuCAGUGACUAAUAAAGAGCUUGC
((((.((((.((((.(((.(((.(((....))).)))))).)))))))).))))..

Structure
--    C    U    A   U   C   a 
  AAGC CUUU AUUA UCA CUG Gug u
  |||| |||| |||| ||| ||| |||  
  UUCG GAAA UAAU AGU GAC cau c
CG    A    -    C   -   u   u 


Annotation confidence Not enough data
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Genome context
chrX: 44688608-44688663 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from mdo-mir-7373c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7373c-5p

Accession MIMAT0028804
Description Monodelphis domestica mdo-miR-7373c-5p mature miRNA
Sequence 1 - AAGCCCUUUUAUUAAUCAUCUGCG - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7373c-3p

Accession MIMAT0028805
Description Monodelphis domestica mdo-miR-7373c-3p mature miRNA
Sequence 35 - CAGUGACUAAUAAAGAGCUUGC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45