miRBase entry: mdo-mir-7385b

Stem-loop mdo-mir-7385b


Accession
MI0023976
Description
Monodelphis domestica mdo-mir-7385b precursor miRNA
Gene family
MIPF0001688; mir-7385


Sequence

19021 reads, 412 reads per million, 5 experiments
AGGUCUGACAGUCUAUCUUCCuaugcuacuguaaaccuuggAACAUAGUCUAUCGGACCUGG
((((((((.((.((((.((((..(((....)))......)))).)))).)).))))))))..

Structure
--        C  U    C    ----ua   u 
  AGGUCUGA AG CUAU UUCC      ugc a
  |||||||| || |||| ||||      |||  
  UCCAGGCU UC GAUA AAgg      aug c
GG        A  U    C    uuccaa   u 


Annotation confidence High
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Genome context
chrX: 4610588-4610649 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mdo-mir-7385b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7385b-5p

Accession MIMAT0028828
Description Monodelphis domestica mdo-miR-7385b-5p mature miRNA
Sequence 1 - AGGUCUGACAGUCUAUCUUCC - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-7385b-3p

Accession MIMAT0028829
Description Monodelphis domestica mdo-miR-7385b-3p mature miRNA
Sequence 42 - AACAUAGUCUAUCGGACCUGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45