miRBase entry: mdo-mir-7385c

Stem-loop mdo-mir-7385c


Accession
MI0023977
Description
Monodelphis domestica mdo-mir-7385c precursor miRNA
Gene family
MIPF0001688; mir-7385


Sequence

28403 reads, 538 reads per million, 5 experiments
AGGUCUGAUACUCUAUCUUUCAgugauguucuaaaaccugGAACAUAGUUUGUCUGGCCUGG
(((((.((((..((((.((((((..............)))))).))))..)))).)))))..

Structure
--     U    CU    C      ugaugu 
  AGGUC GAUA  CUAU UUUCAg      u
  ||||| ||||  |||| ||||||       
  UCCGG CUGU  GAUA AAGguc      c
GG     U    UU    C      caaaau 


Annotation confidence High
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Genome context
chrX: 4611475-4611536 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mdo-mir-7385c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7385c-5p

Accession MIMAT0028830
Description Monodelphis domestica mdo-miR-7385c-5p mature miRNA
Sequence 1 - AGGUCUGAUACUCUAUCUUUCA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7385c-3p

Accession MIMAT0028831
Description Monodelphis domestica mdo-miR-7385c-3p mature miRNA
Sequence 41 - GAACAUAGUUUGUCUGGCCUGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45