Stem-loop mdo-mir-1-2

Accession

MI0024006

Description

Monodelphis domestica mdo-mir-1-2 precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

7177073 reads, 96951 reads per million, 5 experiments

ACAUACUACUUUAUAUGCCCAUAugaacgugcuaagcuaUGGAAUGUAAAGAAGUAUGUAU
(((((((.((((((((..(((((..............))))).)))))))).)))))))..

Structure

--       A        GC     ugaacg 
  ACAUACU CUUUAUAU  CCAUA      u
  ||||||| ||||||||  |||||       
  UGUAUGA GAAAUGUA  GGUau      g
UA       A        -A     cgaauc 

Annotation confidence Not enough data

Genome context

chr1: 476676455-476676515 [-]

Mature mdo-miR-1-3p

• Accession: MIMAT0004085
• Description: Monodelphis domestica mdo-miR-1-3p mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1-2-5p

• Accession: MIMAT0031035
• Description: Monodelphis domestica mdo-miR-1-2-5p mature miRNA
• Sequence: 1 - ACAUACUACUUUAUAUGCCCAUA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45