Stem-loop mdo-mir-7398f

Accession

MI0024016

Description

Monodelphis domestica mdo-mir-7398f precursor miRNA

Sequence

2307 reads, 38 reads per million, 5 experiments

AGUGUAGAAGAGAGUGGGAAUGUCauguucuaucaggCAACGCACUCCUUUCUCGCUGC
((((.(((((.(((((.(..((((.((......)))))).).))))).)))))))))..

Structure

--    U     A     G AA    a  uu 
  AGUG AGAAG GAGUG G  UGUC ug  c
  |||| ||||| ||||| |  |||| ||   
  UCGC UCUUU CUCAC C  ACgg ac  u
CG    -     C     G -A    -  ua 

Annotation confidence Not enough data

Genome context

chrX: 57279275-57279333 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7398f

Mature mdo-miR-7398f-5p

• Accession: MIMAT0028898
• Description: Monodelphis domestica mdo-miR-7398f-5p mature miRNA
• Sequence: 1 - AGUGUAGAAGAGAGUGGGAAUGUC - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398f-3p

• Accession: MIMAT0028899
• Description: Monodelphis domestica mdo-miR-7398f-3p mature miRNA
• Sequence: 38 - CAACGCACUCCUUUCUCGCUGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45