miRBase entry: mdo-mir-7398o

Stem-loop mdo-mir-7398o


Accession
MI0024022
Description
Monodelphis domestica mdo-mir-7398o precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

24464 reads, 403 reads per million, 5 experiments
UGUGUGGAGGUAAGGAACUACGCcguuuucucucugccgGUAAAUCCUUGCCUCUCACUUU
.(((.(((((((((((.....((((............))))...))))))))))))))...

Structure
--U   U           ACUAC    uuuuc 
   GUG GGAGGUAAGGA     GCcg     u
   ||| |||||||||||     ||||      
   CAC UCUCCGUUCCU     UGgc     c
UUU   -           --AAA    cgucu 


Annotation confidence Not enough data
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Genome context
chrX: 57286131-57286191 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from mdo-mir-7398o
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398o-5p

Accession MIMAT0028908
Description Monodelphis domestica mdo-miR-7398o-5p mature miRNA
Sequence 1 - UGUGUGGAGGUAAGGAACUACGC - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7398o-3p

Accession MIMAT0028909
Description Monodelphis domestica mdo-miR-7398o-3p mature miRNA
Sequence 40 - GUAAAUCCUUGCCUCUCACUUU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45