miRBase entry: mdo-mir-7398c

Stem-loop mdo-mir-7398c


Accession
MI0024025
Description
Monodelphis domestica mdo-mir-7398c precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

85 reads, 3 reads per million, 5 experiments
UGUGUAGAGGCAGGGAAAUAUGCUGuguuuucucuuucgGUAAAUCCUUGUUUCUCACAGU
((((.(((((((((((....(((((............)))))..)))))))))))))))..

Structure
--    U           AAUA     uguuu 
  UGUG AGAGGCAGGGA    UGCUG     u
  |||| |||||||||||    |||||      
  ACAC UCUUUGUUCCU    AUGgc     c
UG    -           --AA     uuucu 


Annotation confidence Not enough data
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Genome context
chrX: 57288057-57288117 [+]
Clustered miRNAs
19 other miRNAs are < 10 kb from mdo-mir-7398c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398c-5p

Accession MIMAT0028914
Description Monodelphis domestica mdo-miR-7398c-5p mature miRNA
Sequence 1 - UGUGUAGAGGCAGGGAAAUAUGCUG - 25
Evidence experimental
Illumina [1]

Mature mdo-miR-7398c-3p

Accession MIMAT0028915
Description Monodelphis domestica mdo-miR-7398c-3p mature miRNA
Sequence 40 - GUAAAUCCUUGUUUCUCACAGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45