miRBase entry: mdo-mir-7398b

Stem-loop mdo-mir-7398b


Accession
MI0024026
Description
Monodelphis domestica mdo-mir-7398b precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

115 reads, 2 reads per million, 5 experiments
UGUGUAGAGAUGGGAAAUAUGCUguguuuucucuucuggUAAAUUUCUUGCCUCUCACAGU
((((.((((.((((((((.((((..............)))).)))))))).))))))))..

Structure
--    U    A        A    guguuu 
  UGUG AGAG UGGGAAAU UGCU      u
  |||| |||| |||||||| ||||       
  ACAC UCUC GUUCUUUA AUgg      c
UG    -    C        A    ucuucu 


Annotation confidence Not enough data
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Genome context
chrX: 57288723-57288783 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from mdo-mir-7398b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398b-5p

Accession MIMAT0028916
Description Monodelphis domestica mdo-miR-7398b-5p mature miRNA
Sequence 1 - UGUGUAGAGAUGGGAAAUAUGCU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7398b-3p

Accession MIMAT0028917
Description Monodelphis domestica mdo-miR-7398b-3p mature miRNA
Sequence 40 - UAAAUUUCUUGCCUCUCACAGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45