Stem-loop mdo-mir-7398p

Accession

MI0024031

Description

Monodelphis domestica mdo-mir-7398p precursor miRNA

Gene family

MIPF0001643; mir-7398

Sequence

1039 reads, 20 reads per million, 5 experiments

UGUGUGGAGGCAAGGAACUAUGCcguuuugucucucucgguAAAUCCUUGCGUCUCACAGU
((((.(((.(((((((....(((((............)))))..))))))).)))))))..

Structure

--    U   G       ACUA     uuuug 
  UGUG GGA GCAAGGA    UGCcg     u
  |||| ||| |||||||    |||||      
  ACAC UCU CGUUCCU    Auggc     c
UG    -   G       --AA     ucucu 

Annotation confidence High

Genome context

chrX: 57296466-57296526 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from mdo-mir-7398p

Mature mdo-miR-7398p-5p

• Accession: MIMAT0028918
• Description: Monodelphis domestica mdo-miR-7398p-5p mature miRNA
• Sequence: 1 - UGUGUGGAGGCAAGGAACUAUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398p-3p

• Accession: MIMAT0028919
• Description: Monodelphis domestica mdo-miR-7398p-3p mature miRNA
• Sequence: 42 - AAAUCCUUGCGUCUCACAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45