miRBase entry: mdo-mir-7398s

Stem-loop mdo-mir-7398s


Accession
MI0024034
Description
Monodelphis domestica mdo-mir-7398s precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

966 reads, 20 reads per million, 5 experiments
UGUAGAGAAUGGUGAGUAUGCUguucucuaucagGUAAUUCACCCUUCUCUCACU
.((((((((.(((((((...(((........)))...))))))).)))))).)).

Structure
U  -      U       AUG   uuc 
 GU AGAGAA GGUGAGU   CUg   u
 || |||||| |||||||   |||    
 CA UCUCUU CCACUUA   gac   c
U  C      C       AUG   uau 


Annotation confidence Not enough data
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Genome context
chrX: 57298336-57298390 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from mdo-mir-7398s
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398s-5p

Accession MIMAT0028924
Description Monodelphis domestica mdo-miR-7398s-5p mature miRNA
Sequence 1 - UGUAGAGAAUGGUGAGUAUGCU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7398s-3p

Accession MIMAT0028925
Description Monodelphis domestica mdo-miR-7398s-3p mature miRNA
Sequence 35 - GUAAUUCACCCUUCUCUCACU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45