miRBase entry: mdo-mir-7398j

Stem-loop mdo-mir-7398j


Accession
MI0024036
Description
Monodelphis domestica mdo-mir-7398j precursor miRNA
Gene family
MIPF0001643; mir-7398


Sequence

80 reads, 2 reads per million, 4 experiments
UGUGUAGAGGGGAGUGAGGGUACCacgcacuaucgggUAACCUUUUCUACUCUCACAGU
((((.((((.((((.((((.((((.((......)))))).)))))))).))))))))..

Structure
--    U    G    U    G    a  ca 
  UGUG AGAG GGAG GAGG UACC cg  c
  |||| |||| |||| |||| |||| ||   
  ACAC UCUC UCUU UUCC AUgg gc  u
UG    -    A    -    A    -  ua 


Annotation confidence Not enough data
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Genome context
chrX: 57306266-57306324 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from mdo-mir-7398j
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398j-5p

Accession MIMAT0028928
Description Monodelphis domestica mdo-miR-7398j-5p mature miRNA
Sequence 1 - UGUGUAGAGGGGAGUGAGGGUACC - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7398j-3p

Accession MIMAT0028929
Description Monodelphis domestica mdo-miR-7398j-3p mature miRNA
Sequence 38 - UAACCUUUUCUACUCUCACAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45