Stem-loop mdo-mir-7398t

Accession

MI0024039

Description

Monodelphis domestica mdo-mir-7398t precursor miRNA

Gene family

MIPF0001643; mir-7398

Sequence

71 reads, 3 reads per million, 5 experiments

AGUGUAGAGGUGGCUAAGAUGCugugaucugucucagguAAUUUAUCCACCUCUCACAAU
.(((.((((((((.((((.((((.(((......))))))).)))).)))))))))))...

Structure

--A   U        C    A    g   uc 
   GUG AGAGGUGG UAAG UGCu uga  u
   ||| |||||||| |||| |||| |||   
   CAC UCUCCACC AUUU Augg acu  g
UAA   -        U    A    -   cu 

Annotation confidence Not enough data

Genome context

chrX: 57314588-57314647 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from mdo-mir-7398t

Mature mdo-miR-7398t-5p

• Accession: MIMAT0028934
• Description: Monodelphis domestica mdo-miR-7398t-5p mature miRNA
• Sequence: 1 - AGUGUAGAGGUGGCUAAGAUGC - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398t-3p

• Accession: MIMAT0028935
• Description: Monodelphis domestica mdo-miR-7398t-3p mature miRNA
• Sequence: 40 - AAUUUAUCCACCUCUCACAAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45