Stem-loop sequence oan-let-7c-2

AccessionMI0024054 (change log)
DescriptionOrnithorhynchus anatinus let-7c-2 stem-loop
Gene family MIPF0000002; let-7
Stem-loop
   --u   g   u             ua  g  a ac 
5'    gag uag agguuguaugguu  ga uc c  c
      ||| ||| |||||||||||||  || || |   
3'    uuc auc uccaacaugucaa  uu ag g  c
   ccu   g   u             --  g  - gc 
Get sequence
Deep sequencing
10911776 reads, 1.83e+05 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (OANA5) Overlapping transcripts
Ultra41: 2047378-2047444 [+]
sense
ENSOANT00000026147 ; oan-let-7c-2-201; exon 1
Clustered miRNAs
< 10kb from oan-let-7c-2
oan-mir-99Ultra41: 2045338-2045439 [+]
oan-let-7c-2Ultra41: 2047378-2047444 [+]
Database links

Mature sequence oan-let-7c-5p

Accession MIMAT0028958
Sequence

1 - 

ugagguaguagguuguaugguu

 - 22

Get sequence
Deep sequencing21821418 reads, 5 experiments
Evidence experimental; Illumina [1]
Database links

Mature sequence oan-let-7c-3p

Accession MIMAT0028959
Sequence

46 - 

cuguacaaccuucuagcuuucc

 - 67

Get sequence
Deep sequencing2082 reads, 5 experiments
Evidence experimental; Illumina [1]

References

1
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).