miRBase entry: oan-mir-181b-2

Stem-loop oan-mir-181b-2


Accession
MI0024067
Description
Ornithorhynchus anatinus oan-mir-181b-2 precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

111242 reads, 1486 reads per million, 5 experiments
AACAUUCAUUGCUGUCGGUGGguuuuugucugaaucaacucACUGAUCAAUGAAUGCAAA
..(((((((((..(((((((((((..(......)..))))))))))))))))))))....

Structure
--AA         CU           uu gu 
    CAUUCAUUG  GUCGGUGGguu  u  c
    |||||||||  |||||||||||  |   
    GUAAGUAAC  UAGUCAcucaa  a  u
AAAC         --           cu ag 


Annotation confidence Not enough data
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Genome context
Contig3879: 3672-3731 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-181b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-181b-5p

Accession MIMAT0006835
Description Ornithorhynchus anatinus oan-miR-181b-5p mature miRNA
Sequence 1 - AACAUUCAUUGCUGUCGGUGG - 21
Evidence experimental
Illumina [1]
Database links

Mature oan-miR-181b-2-3p

Accession MIMAT0031055
Description Ornithorhynchus anatinus oan-miR-181b-2-3p mature miRNA
Sequence 42 - ACUGAUCAAUGAAUGCAAA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45