miRBase entry: oan-mir-34b

Stem-loop oan-mir-34b


Accession
MI0024078
Description
Ornithorhynchus anatinus oan-mir-34b precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

4549 reads, 174 reads per million, 5 experiments
AGGCAGUGUAGUUAGCUGAUUGGaccaucccgcccgcAAUCACUAACUCCACUGCCAUC
.(((((((.((((((.((((((..............)))))))))))).)))))))...

Structure
--A       U      C      Gaccau 
   GGCAGUG AGUUAG UGAUUG      c
   ||||||| |||||| ||||||       
   CCGUCAC UCAAUC ACUAAc      c
CUA       C      -      gcccgc 


Annotation confidence High
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Genome context
Contig8579: 9814-9872 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-34b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-34b-5p

Accession MIMAT0028988
Description Ornithorhynchus anatinus oan-miR-34b-5p mature miRNA
Sequence 1 - AGGCAGUGUAGUUAGCUGAUUGG - 23
Evidence experimental
Illumina [1]

Mature oan-miR-34b-3p

Accession MIMAT0028989
Description Ornithorhynchus anatinus oan-miR-34b-3p mature miRNA
Sequence 38 - AAUCACUAACUCCACUGCCAUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45